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Effects of an Opal Termination Codon Preceding the nsP4 Gene Sequence in the O'Nyong-Nyong Virus Genome on Anopheles gambiae Infectivity

机译:O'Nyong-Nyong病毒基因组中nsP4基因序列之前的蛋白石终止密码子对冈比亚按蚊感染的影响

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摘要

The genomic RNA of an alphavirus encodes four different nonstructural proteins, nsP1, nsP2, nsP3, and nsP4. The polyprotein P123 is produced when translation terminates at an opal termination codon between nsP3 and nsP4. The polyprotein P1234 is produced when translational readthrough occurs or when the opal termination codon has been replaced by a sense codon in the alphavirus genome. Evolutionary pressures appear to have maintained genomic sequences encoding both a stop codon (opal) and an open reading frame (arginine) as a general feature of the O'nyong-nyong virus (ONNV) genome, indicating that both are required at some point. Alternate replication of ONNVs in both vertebrate and invertebrate hosts may determine predominance of a particular codon at this locus in the viral quasispecies. However, no systematic study has previously tested this hypothesis in whole animals. We report here the results of the first study to investigate in a natural mosquito host the functional significance of the opal stop codon in an alphavirus genome. We used a full-length cDNA clone of ONNV to construct a series of mutants in which the arginine between nsP3 and nsP4 was replaced with an opal, ochre, or amber stop codon. The presence of an opal stop codon upstream of nsP4 nearly doubled (75.5%) the infectivity of ONNV over that of virus possessing a codon for the amino acid arginine at the corresponding position (39.8%). Although the frequency with which the opal virus disseminated from the mosquito midgut did not differ significantly from that of the arginine virus on days 8 and 10, dissemination did began earlier in mosquitoes infected with the opal virus. Although a clear fitness advantage is provided to ONNV by the presence of an opal codon between nsP3 and nsP4 in Anopheles gambiae, sequence analysis of ONNV RNA extracted from mosquito bodies and heads indicated codon usage at this position corresponded with that of the virus administered in the blood meal. These results suggest that while selection of ONNV variants is occurring, de novo mutation at the position between nsP3 and nsP4 does not readily occur in the mosquito. Taken together, these results suggest that the primary fitness advantage provided to ONNV by the presence of an opal codon between nsP3 and nsP4 is related to mosquito infectivity.
机译:甲型病毒的基因组RNA编码四种不同的非结构蛋白nsP1,nsP2,nsP3和nsP4。当翻译终止于nsP3和nsP4之间的蛋白石终止密码子时,产生多蛋白P123。当发生翻译通读或蛋白病毒中的蛋白石终止密码子已被有义密码子替代时,会产生多蛋白P1234。进化压力似乎维持了编码终止密码子(蛋白石)和开放阅读框(精氨酸)的基因组序列,这是O'nyong-nyong病毒(ONNV)基因组的一般特征,表明两者在某个时候都是必需的。在脊椎动物和无脊椎动物宿主中,ONNV的交替复制可以确定特定密码子在病毒准种中此基因座的优势。但是,以前没有系统的研究在整个动物中检验过这一假设。我们在这里报告的第一个研究结果,以调查天然蚊子宿主中甲病毒基因组中蛋白石终止密码子的功能意义。我们使用ONNV的全长cDNA克隆构建了一系列突变体,其中nsP3和nsP4之间的精氨酸被蛋白石,色或琥珀色终止密码子代替。 nsP4上游的蛋白石终止密码子的存在几乎使ONNV的感染力(在相应位置的氨基酸精氨酸拥有密码子的病毒(39.8%))的感染力增加了一倍(75.5%)。尽管在第8天和第10天,蛋白石病毒从蚊子中肠传播的频率与精氨酸病毒的传播频率没有显着差异,但在感染蛋白石病毒的蚊子中确实开始传播。尽管冈比亚按蚊中nsP3和nsP4之间存在蛋白石密码子,从而为ONNV提供了明显的适应性优势,但从蚊子和头部提取的ONNV RNA的序列分析表明,该位置的密码子使用与在蚊子中施用的病毒的密码子使用相对应。血粉。这些结果表明,尽管正在进行ONNV变体的选择,但在蚊子中nsP3和nsP4之间的位置不容易发生从头突变。综上所述,这些结果表明,nsP3和nsP4之间存在蛋白石密码子可为ONNV提供主要的健身优势,这与蚊子的感染性有关。

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